FIX: valueerror: input contains nan, infinity or a value too large for dtype(‘float64’)

When working with numerical data in Python, it’s common to encounter floating-point values, including NaN (Not a Number), positive or negative infinity, and large numbers. These values can cause issues when processing data using various Python libraries, such as NumPy, Pandas, or Scikit-learn. One typical error that arises due to these values is the “ValueError: Input contains NaN, infinity or a value too large for dtype(‘float64’)” error. In this article, we will explore the causes of this error and provide solutions to fix it.

Understanding the Error

The “ValueError: Input contains NaN, infinity or a value too large for dtype(‘float64’)” error occurs when a Python function or library encounters an array or dataset containing NaN, infinity, or excessively large floating-point values that cannot be processed correctly. This error is frequently encountered when using Scikit-learn, which requires input data to be finite and without any missing values.

Fixing the Error

To fix the “ValueError: Input contains NaN, infinity or a value too large for dtype(‘float64’)” error, you can follow these steps:

  1. Identify and remove NaN values:

Before processing your data, check for any missing or NaN values, and either remove or replace them with appropriate values. You can use the Pandas library to handle missing values efficiently.


import pandas as pd

# Load your dataset
data = pd.read_csv('your_data.csv')

# Check for missing values

# Remove rows with missing values
data = data.dropna()
  1. Replace NaN values with meaningful values:

Instead of removing rows with missing values, you can fill in the missing data with meaningful values, such as the mean, median, or mode of the corresponding column.


# Replace missing values with the mean of the column
data = data.fillna(data.mean())
  1. Check for and handle infinity values:

Ensure your dataset does not contain any infinity values, as they can also cause the error. You can use the NumPy library to replace infinity values with appropriate finite numbers or remove the corresponding rows.


import numpy as np

# Check for infinity values

# Replace positive/negative infinity with a large finite value
data = data.replace([np.inf, -np.inf], np.finfo('float64').max)
  1. Normalize or scale your data:

If your dataset contains values that are too large for the ‘float64’ data type, consider normalizing or scaling your data to bring the values into an appropriate range. Scikit-learn provides preprocessing tools such as MinMaxScaler and StandardScaler to help you scale your data efficiently.


from sklearn.preprocessing import StandardScaler

# Scale your dataset
scaler = StandardScaler()
scaled_data = scaler.fit_transform(data)


By identifying and handling NaN, infinity, and excessively large values in your dataset, you can effectively fix the “ValueError: Input contains NaN, infinity or a value too large for dtype(‘float64’)” error. Proper data preprocessing is essential to ensure smooth processing and accurate results when working with numerical data in Python libraries like Scikit-learn, NumPy, and Pandas.


Table of Contents

Related posts